Cocoa and oilpalm putative gene database home page

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Sl.No	Contigs	Similarities Found	Accession No	Structure No	Gene Function
1	Contig1	Arabidopisis thaliana	ATJ3	NC_003074.4	Protein binding
2	Contig1	Oryza sativa	Os04g0549600	NC_008397.1	Heat shock protein DnaJ
3	Contig1	Solanum lycopersicum	LOC543595	nil	DnaJ-like protein
4	Contig2	Arabidopisis thaliana	AT5G60390	NC_003076.4	Calmodulin binding,Translation elongation factor activity
5	Contig2	Oryza sativa	Os03g0177500	NC_008396.1	EF-1 alpha
6	Contig2	Zea mays	LOC542555	nil	EF-1 alpha
7	Contig2	Solanum lycopersicum	LOC542555	nil	Elongation factor 1 alpha
8	Contig3	Arabidopisis thaliana	AT4G17390	NC_003075.3	Structural constituent of ribosome
9	Contig3	Oryza sativa	Os03g0598800	NC_008396.1	60S ribosomal protein L15
10	Contig3	Zea mays	ERF2	nil	Ethylene receptor homologue
11	Contig3	Triticum aestivum	LOC542901	nil	60S ribosomal protein L15
12	Contig4	Arabidopisis thaliana	AT1G11910	NC_003070.5	Pepsin A activity
13	Contig4	Oryza sativa	Os01g0631900	NC_008394.1	Aspartic protease activity
14	Contig4	Glycine max	soyAP1	nil	Aspartic protease activity
15	Contig4	Solanum lycopersicum	LOC543969	nil	Aspartic protease activity
16	Contig5	Arabidopisis thaliana	AT2G07070	NC_003071.3	DNA binding
17	Contig5	Oryza sativa	Os02g0159800	NC_008395.1	Cyclin-like F-box domain
18	Contig5	Zea mays	Smh3	nil	Single myb histone 3
19	Contig6	Arabidopisis thaliana	CYT1	NC_003071.3	Mannose-1-phosphate guanylyltransferase activity
20	Contig6	Oryza sativa	Os03g0268400	NC_008396.1	Mannose-1-phosphate guanyltransferase
21	Contig6	Zea mays	LOC541902	nil	ADP-glucose pyrophosphorylase small subunit
22	Contig6	Solanum lycopersicum	LOC541902	nil	GDP-mannose pyrophosphorylase
23	Contig7	Triticum aestivum	AT4G02710	gstf2	Glutathione transferase F2
24	Contig7	Oryza sativa	Os02g0220500	NC_008395.1	Elongation factor 1-gamma
25	Contig7	Zea mays	GSTIV	nil	Glutathione S-transferase IV
26	Contig7	Glycine max	LOC547637	nil	Elongation factor 1-gamma
27	Contig8	Arabidopisis thaliana	PAD1	NC_003074.4	Endopeptidase/ peptidase/ threonine endopeptidase
28	Contig8	Oryza sativa	Os08g0548900	NC_008401.1	Proteasome subunit alpha type 7
29	Contig8	Glycine max	LOC547598	nil	20S proteasome subunit
30	Contig9	Arabidopisis thaliana	ATPDIL2-1	NC_003071.3	Thiol-disulfide exchange intermediate activity
31	Contig9	Oryza sativa	Os01g0339900	NC_008394.1	Thioredoxin-related domain
32	Contig9	Zea mays	PDIL2-1	nil	Protein disulfide isomerase activity
33	Contig9	Triticum aestivum	PDI3	nil	Protein disulfide isomerase activity
34	Contig10	Arabidopisis thaliana	ATGPX6	NC_003075.3	Glutathione peroxidase activity
35	Contig10	Oryza sativa	Os04g0556300	NC_008397.1	Glutathione peroxidase activity
36	Contig10	Triticum aestivum	PHGPX6	nil	Glutathione peroxidase activity
37	Contig11	Arabidopisis thaliana	APX1	NC_003070.5	Ascorbate peroxidase activity
38	Contig11	Oryza sativa	Os07g0694700	NC_008400.1	Ascorbate peroxidase activity
39	Contig11	Glycine max	ERF1	nil	Ascorbate peroxidase activity
40	Contig12	Arabidopisis thaliana	ATRPL23A	NC_003071.3	RNA binding / structural constituent of ribosome
41	Contig12	Oryza sativa	Os01g0348700	NC_008394.1	Ribosomal protein
42	Contig12	Zea mays	LOC541695	nil	Ribosomal protein
43	Contig13	Arabidopisis thaliana	PRP4	NC_003075.3	Proline-rich protein
44	Contig13	Oryza sativa	Os10g0148100	NC_008403.1	Unknown
45	Contig13	Zea mays	LOC542000	nil	Proline-rich protein
46	Contig14	Arabidopisis thaliana	HSC70-1	NC_003076.4	ATP binding
47	Contig14	Oryza sativa	Os11g0703900	NC_008404.1	Heat shock protein
48	Contig14	Zea mays	LOC732808	nil	Lumenal binding protein
49	Contig14	Triticum aestivum	LOC732808	nil	Heat shock protein, molecular chaperone
50	Contig15	Arabidopisis thaliana	EMB2107	NC_003076.4	Proteasome regulatory complex
51	Contig15	Oryza sativa	Os03g0851300	NC_008396.1	Proteasome component
52	Contig15	Zea mays	ZYB9	nil	yabby9 protein
53	Contig16	Arabidopisis thaliana	AT2G01630	NC_003071.3	Hydrolase activity, hydrolyzing O-glycosyl compounds
54	Contig16	Oryza sativa	Os04g0620700	NC_008397.1	RNA-binding region RNP-1 (RNA recognition motif)
55	Contig16	Zea mays	nam1	nil	nam1 protein
56	Contig17	Arabidopisis thaliana	AT1G18540	NC_003070.5	Structural constituent of ribosome
57	Contig17	Oryza sativa	Os04g0473400	NC_008397.1	Ribosomal protein
58	Contig17	Triticum aestivum	ERF1	nil	Ribosomal protein
59	Contig18	Arabidopisis thaliana	AT1G06760	NC_003070.5	DNA binding
60	Contig18	Oryza sativa	Os03g0799000	NC_008396.1	Histone H1
61	Contig18	Zea mays	H1	nil	Histone H1
62	Contig19	Arabidopisis thaliana	AT5G39740	NC_003076.4	Structural constituent of ribosome
63	Contig19	Oryza sativa	Os01g0896800	NC_008394.1	Ribosomal protein
64	Contig19	Zea mays	crp1	nil	crp1 protein
65	Contig19	Triticum aestivum	crp1	nil	Starch branching enzyme I
66	Contig20	Arabidopisis thaliana	AT3G14860	NC_003074.4	Unknown
67	Contig20	Oryza sativa	Os02g0234200	NC_008395.1	Soluble quinoprotein glucose dehydrogenase
68	Contig20	Solanum lycopersicum	HPL	nil	Fatty acid hydroperoxide lyase
69	Contig21	Arabidopisis thaliana	AT3G11710	NC_003074.4	ATP binding, lysine-tRNA ligase activity
70	Contig21	Oryza sativa	Os03g0586800	NC_008396.1	Lysyl-tRNA Synthetase activity
71	Contig21	Solanum lycopersicum	LysRS	nil	Lysyl-tRNA synthetase activity
72	Contig22	Arabidopisis thaliana	AT1G07360	NC_003070.5	RNA binding
73	Contig22	Oryza sativa	Os06g0170500	NC_008399.1	RNA-binding
74	Contig22	Zea mays	mtcpn60II	nil	Mitochondrial chaperonin
75	Contig23	Arabidopisis thaliana	AT5G59910	NC_003076.4	DNA binding
76	Contig23	Oryza sativa	Os08g0490900	NC_008401.1	Histone H2B.2
77	Contig23	Triticum aestivum	LOC543184	nil	Histone H2B-8
78	Contig24	Arabidopisis thaliana	AT5G19330	NC_003076.4	Protein binding
79	Contig24	Oryza sativa	Os05g0398100	NC_008398.1	BTB/POZ domain containing protein
80	Contig24	Zea mays	PLC	nil	Phospholipase C
81	Contig25	Arabidopisis thaliana	AT5G48385	NC_003076.4	Unknown
82	Contig25	Oryza sativa	Os09g0248200	NC_008402.1	Unknown
83	Contig25	Zea mays	PLC	nil	Phospholipase C
84	Contig26	Arabidopisis thaliana	AT1G45688	NC_003070.5	Harpin-induced protein
85	Contig26	Oryza sativa	Os06g0163300	NC_008399.1	Harpin-induced protein
86	Contig26	Zea mays	RRB2a	nil	Retinoblastoma-related protein
87	Contig27	Arabidopisis thaliana	MT2A	NC_003074.4	Copper ion binding
88	Contig27	Oryza sativa	Os01g0149800	NC_008394.1	Metallothionein
89	Contig27	Triticum aestivum	LOC542898	nil	Metallothionein
90	Contig28	Arabidopisis thaliana	AT3G49250	NC_003074.4	Chromosome segregation ATPases
91	Contig28	Triticum aestivum	PPO	NC_008397.1	Polyphenol oxidase
92	Contig28	Solanum lycopersicum	ppo	nil	Polyphenol oxidase
93	Contig29	Arabidopisis thaliana	AT1G64090	NC_003070.5	Reticulon
94	Contig29	Oryza sativa	Os01g0736900	NC_008394.1	Reticulon
95	Contig29	Hordeum vulgare	LOC732673	nil	Reticulon
96	Contig30	Arabidopisis thaliana	AT3G19760	NC_003074.4	ATP-dependent helicase activity
97	Contig30	Oryza sativa	Os03g0566800	NC_008396.1	Eukaryotic initiation factor
98	Contig30	Zea mays	LOC732749	nil	Putative RH2 protein
99	Contig31	Arabidopisis thaliana	AT3G05330	NC_003074.4	Hypothetical
100	Contig31	Oryza sativa	Os12g0582600	NC_008405.1	Hypothetical
101	Contig31	Zea mays	see1	nil	Cysteine protease
102	Contig32	Arabidopisis thaliana	AT1G17370	NC_003070.5	mRNA 3'-UTRbinding
103	Contig32	Oryza sativa	Os11g0620100	NC_008404.1	Oligouridylate binding
104	Contig33	Arabidopisis thaliana	AT2G36460	NC_003071.3	Fructose-bisphosphate aldolase activity
105	Contig33	Oryza sativa	Os05g0402700	NC_008398.1	Aldolase
106	Contig33	Zea mays	Aldolase	nil	Aldolase protein
107	Contig33	Glycine max	FBA	nil	Fructose-bisphosphate aldolase
108	Contig34	Arabidopisis thaliana	AT1G76510	NC_003070.5	Transcription factor activity
109	Contig34	Oryza sativa	Os08g0492000	NC_008401.1	Oligopeptide transporter
110	Contig34	Zea mays	KIN8	nil	Kinesin heavy chain
111	Contig34	Glycine max	LOC732594	nil	Abscisic stress ripening
112	Contig35	Arabidopisis thaliana	SKP1	NC_003070.5	Protein binding
113	Contig35	Oryza sativa	OJ1031_C12.33	NT_107079.1	Putative SKP1
114	Contig35	Zea mays	RP-P0	nil	60S acidic ribosomal protein P01
115	Contig36	Arabidopisis thaliana	AT3G10845	NC_003074.4	RNA binding
116	Contig36	Oryza sativa	P0435B05.24	NT_079927.2	O-methyltransferase
117	Contig36	Zea mays	LOC542706	nil	O-methyltransferase
118	Contig36	Triticum aestivum	omet	nil	O-methyltransferase
119	Contig37	Arabidopisis thaliana	AT4G16270	NC_003075.3	Peroxidase activity
120	Contig37	Oryza sativa	Os08g0302000	NC_008401.1	Peroxidase activity
121	Contig37	Solanum lycopersicum	TPX2	nil	Peroxidase activity
122	Contig38	Arabidopisis thaliana	AT3G52140	NC_003074.4	Tetratricopeptide repeat domain
123	Contig38	Oryza sativa	Os02g0717400	NC_008395.1	Tetratricopeptide repeat domain
124	Contig38	Zea mays	LOC542191	nil	Isopentenyl-diphosphate delta isomerase
125	Contig39	Arabidopisis thaliana	TUA6	NC_003075.3	Structural constituent of cytoskeleton
126	Contig39	Oryza sativa	Os11g0247300	NC_008404.1	Alpha-tubulin
127	Contig39	Zea mays	tua3	nil	Alpha-tubulin
128	Contig39	Triticum aestivum	LOC543387	nil	Alpha-tubulin
129	Contig40	Arabidopisis thaliana	AT5G67510	NC_003076.4	Structural constituent of ribosome
130	Contig40	Oryza sativa	Os12g0150100	NC_008405.1	Ribosomal protein
131	Contig40	Zea mays	LOC542610	nil	Ribosomal protein
132	Contig41	Arabidopisis thaliana	AT5G61790	NC_003076.4	Calcium ion binding
133	Contig41	Oryza sativa	Os04g0402100	NC_008397.1	Calnexin
134	Contig41	Glycine max	LOC547851	nil	Calnexin
135	Contig42	Arabidopisis thaliana	AT5G26220	NC_003076.4	Unknown
136	Contig42	Oryza sativa	Os02g0465900	NC_008395.1	RNA-binding region
137	Contig42	Zea mays	MEI2-like	nil	Terminal ear
138	Contig43	Arabidopisis thaliana	AT4G22300	NC_003075.3	Carboxylic ester hydrolase activity
139	Contig43	Oryza sativa	Os04g0669500	NC_008397.1	Phospholipase/Carboxylesterase
140	Contig43	Zea mays	LOC542358	nil	Phosphoglucomutase
141	Contig43	Triticum aestivum	LOC543073	nil	Biostress-resistance
142	Contig44	Arabidopisis thaliana	AT4G28910	NC_003075.3	Unknown
143	Contig44	Oryza sativa	Os12g0570500	NC_008405.1	Hypothetical
144	Contig44	Zea mays	MCM6	nil	Minichromosome maintenance protein